Source code for fdi.dataset.unstructureddataset

# -*- coding: utf-8 -*-

from .abstractcomposite import AbstractComposite
from .typed import Typed
from .attributable import Attributable
from .copyable import Copyable
from .serializable import Serializable
from .odict import ODict
from .dataset import Dataset
from .listener import MetaDataListener

try:
    from .unstructureddataset_datamodel import Model
except ImportError:
    Model = {'metadata': {}}
import xmltodict

import mmap

import json
from copy import copy
from collections import OrderedDict
import logging
# create logger
logger = logging.getLogger(__name__)


[docs]class UnstructuredDataset(Dataset, Copyable): """ Container for data without pre-defined structure or organization.. `MetaDataListener` must stay to the left of `AbstractComposite`. For `xmltodict` `xml_attribs` default to ```False```. """
[docs] def __init__(self, data=None, description=None, typ_=None, doctype=None, version=None, zInfo=None, alwaysMeta=True, **kwds): """ Accepts keyword args to `xmltodict`, e.g. `xml_attribs`, `attr_prefix` and `cdata_key`. """ # collect MDPs from args-turned-local-variables. metasToBeInstalled = copy(locals()) metasToBeInstalled.pop('__class__', None) metasToBeInstalled.pop('kwds', None) metasToBeInstalled.pop('self', None) metasToBeInstalled.pop('zInfo', None) self._list = [] global Model if zInfo is None: zInfo = Model # for `xmltodict` `xml_attribs` default to ```True```. self.xml_attribs = kwds.pop('xml_attribs', True) self.attr_prefix = kwds.pop('attr_prefix', '') self.cdata_key = kwds.pop('cdata_key', 'value') super().__init__(zInfo=zInfo, **metasToBeInstalled, **kwds) # initialize typ_, meta, unit self.data_pv = {} self.put(data=data, doctype=doctype)
[docs] def getData(self): """ Optimized for _data being initialized to be `_data` by `DataWrapper`. """ try: return self._data except AttributeError: return self._data.data
[docs] def make_meta(self, print=False, **kwds): full = self.jsonPath('$..*', **kwds) for pv in full: self.__setattr__(p[0], p[1]) self.data_pv = full
[docs] def put(self, data, doctype=None, **kwds): """ Put data in the dataset. Depending on `doctype`: * Default is `None` for arbitrarily nested Pyton data structure. * Use 'json' to have the input string loaded by `json.loads`, * 'xml' by `xmltodict.parse`. """ if doctype: self.doctype = doctype if data: stid = b'_STID' if issubclass(data.__class__, bytes) else '_STID' # do not ask for self.type unless there is real data. if self.doctype == 'json': if issubclass(data.__class__, mmap.mmap): data = bytearray(data) loaded = json.loads(data, **kwds) elif self.doctype == 'xml': xa = kwds.pop('xml_attribs', None) xa = self.xml_attribs if xa is None else xa ap = kwds.pop('attr_prefix', None) ap = self.attr_prefix if ap is None else ap ck = kwds.pop('cdata_key', None) ck = self.cdata_key if ck is None else ck loaded = xmltodict.parse(data, attr_prefix=ap, cdata_key=ck, xml_attribs=xa, **kwds) else: # Others are loaded as data structures loaded = data #raise ValueError('Cannot process %s type.' % str(doctype)) # set Escape if not set already if hasattr(loaded, '__iter__') and stid in loaded: ds = loaded[stid] if not ds.startswith('0'): loaded[stid] = '0%s' % ds else: loaded = data super().setData(loaded)
# self.make_meta() def __getstate__(self): """ Can be encoded with serializableEncoder """ return OrderedDict( meta=getattr(self, '_meta', None), data=self.getData())